Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane transport permease yadh | DNR41_13410 | Not Available | Negative | 2599530 - 2600300 | 28517.9 |
| abc transporter atp-binding protein | DNR41_13415 | Not Available | Negative | 2600297 - 2601223 | 34679.2 |
| carbonate dehydratase | DNR41_13420 | Not Available | Positive | 2601332 - 2601994 | 25140.3 |
| hypoxanthine phosphoribosyltransferase | DNR41_13425 | Not Available | Negative | 2602035 - 2602571 | 20116.4 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | DNR41_13430 | Not Available | Positive | 2602777 - 2605167 | 86799.2 |
| multicopper oxidase cueo | DNR41_13435 | Not Available | Negative | 2605214 - 2606764 | 56616.6 |
| hypothetical protein | DNR41_13440 | Not Available | Positive | 2606930 - 2607277 | 12854.4 |
| polyamine aminopropyltransferase | DNR41_13445 | Not Available | Positive | 2607383 - 2608249 | 32336.2 |
| s-adenosylmethionine decarboxylase proenzyme | DNR41_13450 | Not Available | Positive | 2608265 - 2609059 | 30430.4 |
| upf0231 family protein | DNR41_13455 | Not Available | Negative | 2609097 - 2609459 | 13942.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





