Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein stae | DNR41_13360 | Not Available | Positive | 2591753 - 2592361 | 20917.9 |
| fimbrial protein staf | DNR41_13365 | Not Available | Positive | 2592388 - 2592984 | 21057.0 |
| fimbrial-like adhesin | DNR41_13370 | Not Available | Positive | 2593010 - 2594299 | 46845.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DNR41_13375 | Not Available | Positive | 2594411 - 2595205 | 28165.0 |
| pantoate--beta-alanine ligase | DNR41_13380 | Not Available | Positive | 2595217 - 2596068 | 31580.5 |
| rpn family recombination-promoting nuclease/putative transposase | DNR41_13385 | Not Available | Negative | 2596150 - 2597034 | 33893.9 |
| hypothetical protein | DNR41_13390 | Not Available | Negative | 2597155 - 2597358 | 7615.28 |
| aspartate 1-decarboxylase | DNR41_13395 | Not Available | Positive | 2597308 - 2597688 | 13834.5 |
| polysaccharide deacetylase family protein | DNR41_13400 | Not Available | Negative | 2597692 - 2598921 | 46323.0 |
| pts sugar transporter subunit iia | DNR41_13405 | Not Available | Negative | 2598985 - 2599425 | 16493.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





