Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | DNR41_13200 | Not Available | Negative | 2554368 - 2555093 | 26745.2 |
| methionine aminopeptidase | DNR41_13210 | Not Available | Positive | 2555461 - 2556255 | 29332.5 |
| bifunctional uridylyltransferase/uridylyl-removing protein | DNR41_13215 | Not Available | Positive | 2556317 - 2558989 | 102364.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DNR41_13220 | Not Available | Positive | 2559020 - 2559844 | 29892.8 |
| duf3461 family protein | DNR41_13225 | Not Available | Positive | 2560156 - 2560542 | 15097.0 |
| cdar family transcriptional regulator | DNR41_13230 | Not Available | Negative | 2560596 - 2561726 | 42619.8 |
| serine endoprotease degp | DNR41_13235 | Not Available | Negative | 2561904 - 2563328 | 49342.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | DNR41_13245 | Not Available | Negative | 2563458 - 2564975 | 59377.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | DNR41_13250 | Not Available | Positive | 2565059 - 2565757 | 24355.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | DNR41_13255 | Not Available | Positive | 2565750 - 2566550 | 29296.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





