Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine import atp-binding protein metn | DNR41_13045 | Not Available | Positive | 2522633 - 2523664 | 37804.7 |
| methionine abc transporter | DNR41_13050 | Not Available | Positive | 2523657 - 2524310 | 23253.6 |
| methionine abc transporter substrate-binding protein metq | DNR41_13055 | Not Available | Positive | 2524350 - 2525165 | 29433.3 |
| rcs stress response system protein rcsf | DNR41_13060 | Not Available | Positive | 2525283 - 2525687 | 14164.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DNR41_13065 | Not Available | Positive | 2525684 - 2526391 | 26379.8 |
| proline--trna ligase | DNR41_13070 | Not Available | Positive | 2526502 - 2528220 | 63606.2 |
| yaef family permuted papain-like enzyme | DNR41_13075 | Not Available | Positive | 2528273 - 2529097 | 29972.9 |
| copper homeostasis/adhesion lipoprotein nlpe | DNR41_13080 | Not Available | Negative | 2529253 - 2529963 | 25817.7 |
| aminoacyl-trna hydrolase | DNR41_13085 | Not Available | Negative | 2529977 - 2530399 | 15638.9 |
| hypothetical protein | DNR41_13090 | Not Available | Negative | 2530396 - 2530941 | 20847.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





