Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf937 domain-containing protein | DNR41_12740 | Not Available | Negative | 2457793 - 2458200 | 14170.0 |
| dna gyrase subunit b | DNR41_12745 | Not Available | Negative | 2458431 - 2460845 | 89941.0 |
| dna replication/repair protein recf | DNR41_12750 | Not Available | Negative | 2460874 - 2461947 | 40516.4 |
| dna polymerase iii subunit beta | DNR41_12755 | Not Available | Negative | 2461947 - 2463047 | 40589.1 |
| chromosomal replication initiator protein dnaa | DNR41_12760 | Not Available | Negative | 2463052 - 2464455 | 52553.7 |
| hypothetical protein | DNR41_12765 | Not Available | Negative | 2464749 - 2464949 | 7367.88 |
| 50s ribosomal protein l34 | DNR41_12770 | Not Available | Positive | 2465062 - 2465202 | 5380.74 |
| ribonuclease p protein component | DNR41_12775 | Not Available | Positive | 2465219 - 2465578 | 13790.0 |
| membrane protein insertion efficiency factor yidd | DNR41_12780 | Not Available | Positive | 2465542 - 2465799 | 9381.61 |
| membrane protein insertase yidc | DNR41_12785 | Not Available | Positive | 2465802 - 2467448 | 61543.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





