Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol-1-phosphate 5-dehydrogenase | DNR41_12070 | Not Available | Positive | 2331404 - 2332552 | 41215.5 |
| mltr family transcriptional regulator | DNR41_12075 | Not Available | Positive | 2332552 - 2333139 | 21991.4 |
| hypothetical protein | DNR41_12080 | Not Available | Negative | 2333150 - 2333359 | 8039.8 |
| yibl family ribosome-associated protein | DNR41_12085 | Not Available | Positive | 2333643 - 2334005 | 13696.8 |
| adhesin | DNR41_12095 | Not Available | Positive | 2335291 - 2340042 | 158293.0 |
| l-lactate permease | DNR41_12105 | Not Available | Positive | 2340452 - 2342107 | 59189.5 |
| transcriptional regulator lldr | DNR41_12110 | Not Available | Positive | 2342107 - 2342883 | 29167.9 |
| alpha-hydroxy-acid oxidizing enzyme | DNR41_12115 | Not Available | Positive | 2342880 - 2344070 | 42772.8 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | DNR41_12120 | Not Available | Positive | 2344118 - 2344591 | 17727.3 |
| serine acetyltransferase | DNR41_12125 | Not Available | Negative | 2344646 - 2345467 | 29318.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





