Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | DNR41_12020 | Not Available | Positive | 2317971 - 2318666 | 25570.5 |
| aldehyde dehydrogenase | DNR41_12025 | Not Available | Negative | 2318713 - 2320251 | 56339.5 |
| fic family protein | DNR41_12030 | Not Available | Negative | 2320359 - 2321654 | 48429.0 |
| l-threonine dehydrogenase | DNR41_12035 | Not Available | Negative | 2321784 - 2322935 | 40366.7 |
| selenocysteinyl-trna-specific translation elongation factor selb | DNR41_12040 | Not Available | Negative | 2323126 - 2324970 | 68862.5 |
| l-selenocysteinyl-trna(sec) synthase | DNR41_12045 | Not Available | Negative | 2324967 - 2326358 | 50728.4 |
| glutathione s-transferase | DNR41_12050 | Not Available | Negative | 2326456 - 2327064 | 22546.3 |
| hlyd family secretion protein | DNR41_12055 | Not Available | Negative | 2327135 - 2328271 | 42015.9 |
| duf3302 domain-containing protein | DNR41_12060 | Not Available | Negative | 2328274 - 2328636 | 13910.9 |
| pts mannitol transporter subunit iicba | DNR41_12065 | Not Available | Positive | 2329172 - 2331085 | 67990.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





