Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | DNR41_11970 | Not Available | Negative | 2308639 - 2309487 | 31083.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | DNR41_11975 | Not Available | Positive | 2309688 - 2310686 | 36602.9 |
| yhch/yjgk/yial family protein | DNR41_11980 | Not Available | Positive | 2310698 - 2311162 | 17390.9 |
| duf4862 family protein | DNR41_11985 | Not Available | Positive | 2311185 - 2312105 | 34433.8 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | DNR41_11990 | Not Available | Positive | 2312219 - 2312686 | 17284.7 |
| 2,3-diketo-l-gulonate transporter large permease yian | DNR41_11995 | Not Available | Positive | 2312491 - 2313966 | 52976.3 |
| trap transporter substrate-binding protein | DNR41_12000 | Not Available | Positive | 2313979 - 2314965 | 36000.2 |
| carbohydrate kinase | DNR41_12005 | Not Available | Positive | 2314969 - 2316465 | 55199.1 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | DNR41_12010 | Not Available | Positive | 2316462 - 2317124 | 23576.2 |
| l-ribulose-5-phosphate 3-epimerase | DNR41_12015 | Not Available | Positive | 2317117 - 2317977 | 32478.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





