Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DNR41_10985 | Not Available | Negative | 2112599 - 2113234 | 23197.3 |
| type 1 glutamine amidotransferase | DNR41_10990 | Not Available | Positive | 2113362 - 2113880 | 18772.4 |
| hypothetical protein | DNR41_10995 | Not Available | Negative | 2113860 - 2114303 | 16778.2 |
| giy-yig nuclease family protein | DNR41_11000 | Not Available | Positive | 2114354 - 2114656 | 11284.6 |
| n-acetyltransferase | DNR41_11005 | Not Available | Negative | 2114643 - 2115146 | 18534.8 |
| scp2 domain-containing protein | DNR41_11010 | Not Available | Negative | 2115140 - 2115664 | 19673.0 |
| u32 family peptidase | DNR41_11015 | Not Available | Positive | 2115873 - 2116868 | 37048.2 |
| u32 family peptidase | DNR41_11020 | Not Available | Positive | 2116877 - 2117755 | 32507.1 |
| llm class flavin-dependent oxidoreductase | DNR41_11025 | Not Available | Positive | 2117836 - 2118843 | 37117.4 |
| tryptophan permease | DNR41_11030 | Not Available | Negative | 2118961 - 2120205 | 44413.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





