Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glutathionylspermidine amidase/synthase | DNR41_10110 | Not Available | Negative | 1942030 - 1943889 | 70623.8 |
| glutathione-dependent disulfide-bond oxidoreductase | DNR41_10115 | Not Available | Positive | 1944094 - 1944960 | 32378.4 |
| hydrogenase-2 operon protein hybg | DNR41_10120 | Not Available | Negative | 1945093 - 1945341 | 8808.67 |
| hydrogenase nickel incorporation protein hybf | DNR41_10125 | Not Available | Negative | 1945354 - 1945695 | 12698.1 |
| hydrogenase-2 assembly chaperone | DNR41_10130 | Not Available | Negative | 1945688 - 1946176 | 17992.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | DNR41_10135 | Not Available | Negative | 1946169 - 1946663 | 17739.8 |
| hydrogenase-2 large chain | DNR41_10140 | Not Available | Negative | 1946663 - 1948366 | 62494.6 |
| ni/fe-hydrogenase b-type cytochrome subunit | DNR41_10145 | Not Available | Negative | 1948363 - 1949541 | 43618.7 |
| hydrogenase 2 operon protein hyba | DNR41_10150 | Not Available | Negative | 1949531 - 1950517 | 35986.9 |
| hydrogenase-2 small chain | DNR41_10155 | Not Available | Negative | 1950520 - 1951638 | 39654.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





