Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DNR41_10060 | Not Available | Positive | 1931645 - 1932817 | 41856.2 |
| lps export abc transporter permease lptg | DNR41_10065 | Not Available | Negative | 1932852 - 1933931 | 39775.5 |
| lps export abc transporter permease lptf | DNR41_10070 | Not Available | Negative | 1933928 - 1934998 | 39892.1 |
| ytfj family protein | DNR41_10075 | Not Available | Negative | 1935029 - 1935589 | 20644.9 |
| hypothetical protein | DNR41_10080 | Not Available | Negative | 1935589 - 1936425 | 32668.5 |
| lipopolysaccharide biosynthesis protein | DNR41_10085 | Not Available | Negative | 1936425 - 1937774 | 48769.2 |
| hypothetical protein | DNR41_10090 | Not Available | Negative | 1937820 - 1938578 | 28164.2 |
| thymidylate kinase | DNR41_10095 | Not Available | Negative | 1938610 - 1939323 | 26426.3 |
| thymidylate kinase | DNR41_10100 | Not Available | Positive | 1939498 - 1940190 | 25369.2 |
| low-affinity inorganic phosphate transporter 2 | DNR41_10105 | Not Available | Negative | 1940239 - 1941738 | 53826.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





