Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminate synthase | DNR41_09900 | Not Available | Negative | 1896596 - 1897636 | 38695.7 |
| shikimate dehydrogenase | DNR41_09905 | Not Available | Negative | 1897633 - 1898256 | 22687.6 |
| polysialic acid transport atp-binding protein kpst | DNR41_09910 | Not Available | Negative | 1898306 - 1898965 | 24940.1 |
| abc transporter permease | DNR41_09915 | Not Available | Negative | 1898962 - 1899798 | 31803.3 |
| type ii secretion system protein | DNR41_09920 | Not Available | Negative | 1900796 - 1901332 | 20401.7 |
| type ii secretion system protein gspl | DNR41_09925 | Not Available | Negative | 1901334 - 1902512 | 44246.5 |
| general secretion pathway protein gspk | DNR41_09930 | Not Available | Negative | 1902509 - 1903486 | 36514.3 |
| type ii secretion system protein gspj | DNR41_09935 | Not Available | Negative | 1903483 - 1904088 | 22271.3 |
| type ii secretion system protein gspi | DNR41_09940 | Not Available | Negative | 1904085 - 1904456 | 13705.6 |
| type ii secretion system protein gsph | DNR41_09945 | Not Available | Negative | 1904453 - 1905016 | 21140.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





