Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 domain-containing protein | DNR41_09795 | Not Available | Positive | 1876210 - 1876728 | 19280.2 |
| antirestriction protein | DNR41_09800 | Not Available | Positive | 1876994 - 1877473 | 17980.2 |
| dna repair protein radc | DNR41_09805 | Not Available | Positive | 1877518 - 1877964 | 16531.0 |
| duf987 domain-containing protein | DNR41_09810 | Not Available | Positive | 1878033 - 1878254 | 8411.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | DNR41_09815 | Not Available | Positive | 1878333 - 1878710 | 13799.4 |
| toxin | DNR41_09820 | Not Available | Positive | 1878757 - 1879134 | 13959.7 |
| hypothetical protein | DNR41_09825 | Not Available | Positive | 1879131 - 1879619 | 18036.5 |
| duf957 domain-containing protein | DNR41_09830 | Not Available | Positive | 1879631 - 1879828 | 7407.73 |
| duf4942 domain-containing protein | DNR41_09835 | Not Available | Positive | 1879913 - 1880758 | 32519.0 |
| eal domain-containing protein | DNR41_09840 | Not Available | Positive | 1880829 - 1882364 | 57602.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





