Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | DNR41_09695 | Not Available | Negative | 1858797 - 1859588 | 29263.9 |
| signal recognition particle protein | DNR41_09700 | Not Available | Positive | 1859755 - 1861116 | 49790.5 |
| 30s ribosomal protein s16 | DNR41_09705 | Not Available | Positive | 1861253 - 1861501 | 9191.08 |
| ribosome maturation factor rimm | DNR41_09710 | Not Available | Positive | 1861520 - 1862068 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DNR41_09715 | Not Available | Positive | 1862099 - 1862866 | 28424.0 |
| 50s ribosomal protein l19 | DNR41_09720 | Not Available | Positive | 1862908 - 1863255 | 13134.0 |
| ompa family protein | DNR41_09725 | Not Available | Negative | 1863332 - 1863814 | 17315.7 |
| diguanylate cyclase | DNR41_09730 | Not Available | Negative | 1863830 - 1865056 | 45973.0 |
| yfir family protein | DNR41_09735 | Not Available | Negative | 1865046 - 1865564 | 18947.1 |
| duf2799 domain-containing protein | DNR41_09740 | Not Available | Negative | 1865713 - 1866078 | 13232.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





