Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein stpa | DNR41_09250 | Not Available | Positive | 1798284 - 1798688 | 15361.4 |
| rhodanese-like domain-containing protein ygap | DNR41_09255 | Not Available | Negative | 1798735 - 1799259 | 18672.9 |
| transcriptional regulator | DNR41_09260 | Not Available | Negative | 1799269 - 1799568 | 10596.9 |
| yqae/pmp3 family membrane protein | DNR41_09265 | Not Available | Positive | 1799751 - 1799909 | 5865.57 |
| peptidoglycan-binding protein lysm | DNR41_09270 | Not Available | Positive | 1799993 - 1800442 | 16064.0 |
| dna-binding transcriptional regulator csir | DNR41_09275 | Not Available | Negative | 1800443 - 1801105 | 25048.4 |
| gaba permease | DNR41_09280 | Not Available | Negative | 1801126 - 1802526 | 51115.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DNR41_09285 | Not Available | Negative | 1802764 - 1804044 | 45731.4 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | DNR41_09290 | Not Available | Negative | 1804058 - 1805506 | 51920.3 |
| l-2-hydroxyglutarate oxidase | DNR41_09295 | Not Available | Negative | 1805529 - 1806797 | 46040.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





