Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1b ribonucleoside-diphosphate reductase subunit beta | DNR41_09200 | Not Available | Negative | 1790448 - 1791407 | 36457.0 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | DNR41_09205 | Not Available | Negative | 1791417 - 1793561 | 80384.3 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | DNR41_09210 | Not Available | Negative | 1793534 - 1793944 | 15371.3 |
| nrdh-redoxin | DNR41_09215 | Not Available | Negative | 1793941 - 1794186 | 9139.0 |
| hypothetical protein | DNR41_09220 | Not Available | Negative | 1794202 - 1794387 | 6837.32 |
| carboxymuconolactone decarboxylase family protein | DNR41_09225 | Not Available | Negative | 1794395 - 1794826 | 16175.4 |
| plp-dependent aminotransferase family protein | DNR41_09230 | Not Available | Positive | 1794914 - 1796248 | 49768.1 |
| duf883 domain-containing protein | DNR41_09235 | Not Available | Negative | 1796305 - 1796634 | 11847.9 |
| duf2002 family protein | DNR41_09240 | Not Available | Positive | 1796786 - 1797130 | 13066.5 |
| l-alanine exporter alae | DNR41_09245 | Not Available | Negative | 1797167 - 1797616 | 16968.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





