Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | DNR41_08900 | Not Available | Negative | 1732436 - 1734997 | 95352.6 |
| nitrous oxide-stimulated promoter family protein | DNR41_08905 | Not Available | Positive | 1735283 - 1735627 | 13577.8 |
| transporter | DNR41_08910 | Not Available | Negative | 1735666 - 1736133 | 15893.3 |
| formate hydrogenlyase transcriptional activator flha | DNR41_08915 | Not Available | Negative | 1736139 - 1738217 | 78456.5 |
| hydrogenase expression/formation protein hype | DNR41_08920 | Not Available | Negative | 1738291 - 1739301 | 35066.5 |
| hydrogenase formation protein hypd | DNR41_08925 | Not Available | Negative | 1739298 - 1740419 | 41367.7 |
| hydrogenase assembly protein hypc | DNR41_08930 | Not Available | Negative | 1740419 - 1740691 | 9732.58 |
| hydrogenase nickel incorporation protein hypb | DNR41_08935 | Not Available | Negative | 1740682 - 1741554 | 31547.8 |
| protein hypa | DNR41_08940 | Not Available | Negative | 1741558 - 1741908 | 13168.9 |
| formate hydrogenlyase regulatory protein hyca | DNR41_08945 | Not Available | Positive | 1742120 - 1742581 | 17642.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





