Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1650206 - 1650282 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1650316 - 1650392 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1650426 - 1650502 | Not Available |
| murein transglycosylase a | DNR41_08505 | Not Available | Positive | 1650711 - 1651808 | 40441.0 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | DNR41_08510 | Not Available | Positive | 1651885 - 1652691 | 28562.6 |
| cysteine desulfurase sulfur acceptor subunit csde | DNR41_08515 | Not Available | Negative | 1652742 - 1653185 | 15925.2 |
| cysteine desulfurase csda | DNR41_08520 | Not Available | Negative | 1653185 - 1654390 | 43361.7 |
| ygdi/ygdr family lipoprotein | DNR41_08525 | Not Available | Positive | 1654582 - 1654809 | 8174.67 |
| glycine cleavage system transcriptional activator | DNR41_08530 | Not Available | Positive | 1655160 - 1656077 | 34403.4 |
| duf423 domain-containing protein | DNR41_08535 | Not Available | Positive | 1656096 - 1656491 | 14348.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





