Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DNR41_08430 | Not Available | Negative | 1635064 - 1635357 | 11526.8 |
| hypothetical protein | DNR41_08435 | Not Available | Negative | 1635326 - 1636159 | 32021.6 |
| type vi secretion system tip protein vgrg | DNR41_08445 | Not Available | Negative | 1637913 - 1640393 | 91710.5 |
| type vi secretion system atpase tssh | DNR41_08450 | Not Available | Negative | 1640405 - 1643050 | 98059.5 |
| type vi secretion system tube protein hcp | DNR41_08455 | Not Available | Negative | 1643242 - 1643733 | 18579.8 |
| ompa family protein | DNR41_08460 | Not Available | Negative | 1643791 - 1645443 | 60409.3 |
| dotu family type iv/vi secretion system protein | DNR41_08465 | Not Available | Negative | 1645456 - 1646121 | 25311.8 |
| type vi secretion system baseplate subunit tssk | DNR41_08470 | Not Available | Negative | 1646118 - 1647455 | 49718.8 |
| type vi secretion system contractile sheath large subunit | DNR41_08475 | Not Available | Negative | 1647473 - 1649011 | 58021.7 |
| type vi secretion system contractile sheath small subunit | DNR41_08480 | Not Available | Negative | 1649070 - 1649570 | 18726.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





