Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | DNR41_08280 | Not Available | Positive | 1595756 - 1596631 | 33109.9 |
| thymidylate synthase | DNR41_08285 | Not Available | Positive | 1596638 - 1597432 | 30481.4 |
| hypothetical protein | DNR41_08290 | Not Available | Negative | 1597425 - 1597607 | 6675.07 |
| prepilin-type cleavage/methylation domain-containing protein | DNR41_08295 | Not Available | Positive | 1597617 - 1598087 | 17908.4 |
| prepilin-type cleavage/methylation domain-containing protein | DNR41_08300 | Not Available | Positive | 1598078 - 1598641 | 20413.4 |
| duf2509 family protein | DNR41_08305 | Not Available | Positive | 1598638 - 1599045 | 14953.3 |
| prepilin-type cleavage/methylation domain-containing protein | DNR41_08310 | Not Available | Positive | 1599030 - 1599353 | 12032.7 |
| exodeoxyribonuclease v subunit gamma | DNR41_08315 | Not Available | Positive | 1599366 - 1602734 | 128829.0 |
| pitrilysin | DNR41_08320 | Not Available | Positive | 1602910 - 1605798 | 107948.0 |
| exodeoxyribonuclease v subunit beta | DNR41_08325 | Not Available | Positive | 1605791 - 1609333 | 134037.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





