Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erythrose 4-phosphate dehydrogenase | DNR41_07865 | Not Available | Positive | 1505394 - 1505495 | 4043.79 |
| d-erythrose-4-phosphate dehydrogenase | DNR41_07870 | Not Available | Positive | 1505449 - 1506468 | 37301.5 |
| phosphoglycerate kinase | DNR41_07875 | Not Available | Positive | 1506518 - 1507681 | 41120.5 |
| class ii fructose-bisphosphate aldolase | DNR41_07880 | Not Available | Positive | 1507896 - 1508975 | 39207.4 |
| mechanosensitive ion channel protein mscs | DNR41_07885 | Not Available | Positive | 1509166 - 1510026 | 30870.8 |
| arginine exporter argo | DNR41_07890 | Not Available | Positive | 1510165 - 1510797 | 23075.9 |
| oxidative stress defense protein | DNR41_07895 | Not Available | Positive | 1510890 - 1511630 | 26628.7 |
| lysr family transcriptional regulator | DNR41_07900 | Not Available | Positive | 1511788 - 1512684 | 34763.7 |
| methylmalonyl-coa mutase | DNR41_07905 | Not Available | Negative | 1512681 - 1513736 | 38947.6 |
| chromosome initiation inhibitor | DNR41_07915 | Not Available | Negative | 1513939 - 1514832 | 33473.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





