Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CG1MAC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1277794 bp
Thymine Count
1276189 bp
Guanine Count
1322691 bp
Cytosine Count
1289142 bp
Genome Length
5165816 bp
Protein-coding Genes
4979 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1 family transposase | DNR41_07615 | Not Available | Positive | 1463895 - 1464249 | 13658.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 1464232 - 1464308 | Not Available |
| duf554 domain-containing protein | DNR41_07620 | Not Available | Negative | 1464414 - 1465121 | 24651.5 |
| hypothetical protein | DNR41_07625 | Not Available | Positive | 1465236 - 1465439 | 7577.34 |
| ornithine decarboxylase | DNR41_07630 | Not Available | Positive | 1465520 - 1467655 | 79429.5 |
| nucleoside permease | DNR41_07635 | Not Available | Negative | 1467704 - 1468960 | 46392.9 |
| lytic murein transglycosylase | DNR41_07640 | Not Available | Negative | 1469162 - 1470241 | 40114.8 |
| fe(2+)-trafficking protein | DNR41_07645 | Not Available | Negative | 1470306 - 1470581 | 10953.2 |
| adenine dna glycosylase | DNR41_07650 | Not Available | Negative | 1470609 - 1471661 | 39231.2 |
| adenine glycosylase | DNR41_07655 | Not Available | Negative | 1471615 - 1471752 | 4915.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





