Pseudomonas syringae pv. syringae strain B728a

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. syringae strain B728a is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is classified as a heterotroph, meaning it derives its energy from organic compounds, which enables it to thrive in a variety of habitats. As an aerobic organism, P. syringae pv. syringae strain B728a requires oxygen for its metabolic processes, which is a characteristic feature of many members of the Pseudomonas genus. The versatility of P. syringae pv. syringae strain B728a in utilizing diverse organic substrates may contribute to its adaptability in different environmental conditions. Its ability to inhabit multiple habitats suggests a potential role in various ecological niches, where it could participate in nutrient cycling and interact with other microbial communities. Moreover, the strain's characteristics may allow it to contribute to the degradation of pollutants, highlighting its significance in bioremediation contexts. Understanding the traits of Pseudomonas syringae pv. syringae strain B728a can provide insights into its ecological roles and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. syringae strain B728a
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. syringae strain B728a


Gene Summary

Adenine Count

1357034 bp

Thymine Count

1331887 bp

Guanine Count

1891949 bp

Cytosine Count

1937382 bp

Genome Length

6518252 bp

Protein-coding Genes

5783 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1066594 - 1066606Not Available
Tyrosine-type recombinase/integraseDND47_04145Not Available-1066701 - 106766636651.1
duf2384 domain-containing proteinDND47_04150Not Available+1067890 - 106835416919.2
oxidoreductaseDND47_04155Not Available-1068360 - 106934334423.4
tetr family transcriptional regulatorDND47_04160Not Available-1069393 - 107005224480.4
nitronate monooxygenaseDND47_04165Not Available+1070188 - 107126738047.6
molybdate abc transporter substrate-binding proteinDND47_04170Not Available+1071369 - 107213626966.1
molybdate abc transporter permease subunitDND47_04175Not Available+1072137 - 107281723939.0
Abc transporterDND47_04180Not Available+1072821 - 107390940021.6
Putative topoisomerasae i proteinDND47_04185Not Available+1073999 - 107506940191.4

Displaying genes 1 – 10 of 11225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1768 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da

Displaying 1–10 of 1768 metabolites