Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | DHW03_04785 | Not Available | Positive | 1085326 - 1086699 | 52008.5 |
| hypothetical protein | DHW03_04790 | Not Available | Positive | 1086718 - 1087053 | 12809.4 |
| extradiol dioxygenase | DHW03_04795 | Not Available | Positive | 1087150 - 1087566 | 15498.6 |
| hypothetical protein | DHW03_04800 | Not Available | Negative | 1087711 - 1088790 | 39820.0 |
| transcriptional regulator | DHW03_04805 | Not Available | Positive | 1088885 - 1089229 | 13253.5 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DHW03_04810 | Not Available | Negative | 1089504 - 1090802 | 48352.3 |
| nudix hydrolase | DHW03_04815 | Not Available | Negative | 1090808 - 1091263 | 17415.7 |
| cation diffusion facilitator family transporter | DHW03_04820 | Not Available | Negative | 1091250 - 1092236 | 37017.3 |
| aspartate aminotransferase | DHW03_04825 | Not Available | Positive | 1092403 - 1093545 | 41908.8 |
| abc transporter | DHW03_04830 | Not Available | Negative | 1093812 - 1095053 | 45736.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

