Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | DHW03_04630 | Not Available | Positive | 1054134 - 1054784 | 25369.1 |
| 3-hydroxybutyryl-coa dehydrogenase | DHW03_04635 | Not Available | Positive | 1054857 - 1055756 | 32452.5 |
| holliday junction branch migration dna helicase ruvb | DHW03_04640 | Not Available | Positive | 1055870 - 1056892 | 37541.1 |
| carbon-nitrogen hydrolase | DHW03_04650 | Not Available | Positive | 1057778 - 1059286 | 57593.1 |
| hypothetical protein | DHW03_04655 | Not Available | Negative | 1059363 - 1059569 | 7498.03 |
| trna epoxyqueuosine(34) reductase queg | DHW03_04660 | Not Available | Positive | 1059694 - 1060629 | 35649.5 |
| peptidase | DHW03_04665 | Not Available | Negative | 1060640 - 1062502 | 70327.3 |
| dna polymerase iii subunit epsilon | DHW03_04670 | Not Available | Negative | 1062550 - 1063503 | 36235.3 |
| duf3857 domain-containing protein | DHW03_04675 | Not Available | Positive | 1063690 - 1065657 | 74817.4 |
| hypothetical protein | DHW03_04680 | Not Available | Positive | 1065658 - 1067562 | 72380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

