Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminotransferase | DHW03_04425 | Not Available | Positive | 1013939 - 1015084 | 42696.3 |
| nitrilase family protein | DHW03_04430 | Not Available | Positive | 1015127 - 1015906 | 30300.5 |
| glycosylasparaginase | DHW03_04435 | Not Available | Positive | 1015957 - 1016991 | 37164.0 |
| copper homeostasis protein cutc | DHW03_04440 | Not Available | Positive | 1017025 - 1017819 | 28666.4 |
| hypothetical protein | DHW03_04445 | Not Available | Positive | 1017884 - 1018081 | 7147.78 |
| duf983 domain-containing protein | DHW03_04450 | Not Available | Negative | 1018108 - 1018509 | 15101.7 |
| crp/fnr family transcriptional regulator | DHW03_04455 | Not Available | Negative | 1018605 - 1019186 | 21966.9 |
| d-alanine--d-alanine ligase | DHW03_04460 | Not Available | Negative | 1019198 - 1020184 | 36538.9 |
| serine/threonine protein kinase | DHW03_04465 | Not Available | Positive | 1020417 - 1021190 | 28220.2 |
| endolytic transglycosylase mltg | DHW03_04470 | Not Available | Positive | 1021208 - 1022263 | 40223.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

