Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DHW03_03925 | Not Available | Negative | 903705 - 904388 | 25946.4 |
| rna methyltransferase | DHW03_03930 | Not Available | Negative | 904687 - 905217 | 19784.9 |
| galactose-1-epimerase | DHW03_03935 | Not Available | Positive | 905391 - 906437 | 39287.8 |
| phage envelope protein | DHW03_03940 | Not Available | Positive | 906440 - 906838 | 14745.1 |
| phosphorylase | DHW03_03945 | Not Available | Negative | 907199 - 908059 | 31502.1 |
| yigz family protein | DHW03_03950 | Not Available | Negative | 908115 - 908729 | 23051.0 |
| transporter | DHW03_03955 | Not Available | Negative | 908716 - 909585 | 32177.2 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DHW03_03960 | Not Available | Negative | 909585 - 910637 | 39670.8 |
| peptide chain release factor n(5)-glutamine methyltransferase | DHW03_03965 | Not Available | Positive | 910719 - 911567 | 32094.9 |
| site-specific tyrosine recombinase xerd | DHW03_03970 | Not Available | Negative | 911568 - 912467 | 33722.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

