Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | DHW03_03780 | Not Available | Positive | 874823 - 875935 | 41236.5 |
| dna-binding response regulator | DHW03_03785 | Not Available | Positive | 876040 - 876729 | 25943.6 |
| rna pseudouridine synthase | DHW03_03790 | Not Available | Positive | 876890 - 877612 | 27548.4 |
| chloride channel protein | DHW03_03795 | Not Available | Positive | 877690 - 879480 | 65719.2 |
| fis family transcriptional regulator | DHW03_03800 | Not Available | Negative | 879583 - 880992 | 52300.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 881285 - 881664 | Not Available |
| copper oxidase | DHW03_03810 | Not Available | Negative | 881712 - 882134 | 15548.8 |
| sco family protein | DHW03_03815 | Not Available | Negative | 882216 - 882866 | 24923.8 |
| yhs domain-containing protein | DHW03_03820 | Not Available | Negative | 882911 - 883033 | 4685.69 |
| hypothetical protein | DHW03_03825 | Not Available | Negative | 883185 - 883634 | 16950.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

