Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | DHW03_02690 | Not Available | Positive | 593119 - 594306 | 44521.3 |
| transcriptional regulator | DHW03_02695 | Not Available | Positive | 594331 - 595362 | 38294.8 |
| lactate dehydrogenase | DHW03_02700 | Not Available | Positive | 595825 - 596253 | 15337.6 |
| oxygen-independent coproporphyrinogen iii oxidase | DHW03_02705 | Not Available | Positive | 596253 - 597599 | 50910.9 |
| heavy metal translocating p-type atpase | DHW03_02710 | Not Available | Positive | 597610 - 599994 | 89164.1 |
| cbb3-type cytochrome oxidase assembly protein ccos | DHW03_02715 | Not Available | Positive | 599991 - 600170 | 6801.16 |
| cytochrome c oxidase cbb3 | DHW03_02720 | Not Available | Positive | 600244 - 602385 | 80998.8 |
| hypothetical protein | DHW03_02725 | Not Available | Positive | 602388 - 602570 | 6983.66 |
| cytochrome c | DHW03_02730 | Not Available | Positive | 602758 - 603525 | 28616.9 |
| cytochrome c oxidase accessory protein ccog | DHW03_02735 | Not Available | Positive | 603512 - 604885 | 52406.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

