Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i fole | DHW03_00150 | Not Available | Negative | 30787 - 31467 | 25429.5 |
| hypothetical protein | DHW03_00155 | Not Available | Negative | 32370 - 34304 | 73178.9 |
| diguanylate cyclase | DHW03_00160 | Not Available | Positive | 34470 - 35318 | 32152.6 |
| response regulator | DHW03_00165 | Not Available | Positive | 35373 - 35735 | 12921.7 |
| hypothetical protein | DHW03_00170 | Not Available | Positive | 35747 - 36274 | 19984.2 |
| na+/h+ antiporter nhaa | DHW03_00175 | Not Available | Positive | 36330 - 37481 | 41368.1 |
| alpha-ketoglutarate-dependent dioxygenase alkb | DHW03_00180 | Not Available | Negative | 37564 - 38172 | 23001.5 |
| error-prone dna polymerase | DHW03_00185 | Not Available | Negative | 38182 - 41418 | 122414.0 |
| nucleotidyltransferase | DHW03_00190 | Not Available | Negative | 41437 - 42933 | 56540.9 |
| error-prone repair protein imua | DHW03_00195 | Not Available | Negative | 42930 - 43679 | 27619.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

