Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paraquat-inducible protein a | DHW03_01825 | Not Available | Positive | 386733 - 388058 | 49861.2 |
| 2-methylisocitrate lyase | DHW03_01830 | Not Available | Positive | 388105 - 389430 | 49624.4 |
| rna polymerase subunit sigma-70 | DHW03_01835 | Not Available | Positive | 389610 - 390179 | 22242.1 |
| anti-sigma factor | DHW03_01840 | Not Available | Positive | 390239 - 391435 | 44626.9 |
| hypothetical protein | DHW03_01845 | Not Available | Positive | 391739 - 395323 | 131552.0 |
| ragb/susd family nutrient uptake outer membrane protein | DHW03_01850 | Not Available | Positive | 395340 - 396755 | 52432.2 |
| thioredoxin | DHW03_01855 | Not Available | Positive | 396837 - 397964 | 41796.4 |
| alkyl hydroperoxide reductase | DHW03_01860 | Not Available | Positive | 397969 - 399093 | 42155.1 |
| hypothetical protein | DHW03_01865 | Not Available | Negative | 399113 - 399310 | 7702.19 |
| glycoside hydrolase family 2 | DHW03_01870 | Not Available | Positive | 399685 - 402876 | 120365.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

