Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 272416 - 272500 | Not Available |
| trigger factor | DHW03_01305 | Not Available | Positive | 272674 - 274023 | 51456.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DHW03_01310 | Not Available | Positive | 274444 - 275151 | 26091.3 |
| atp-dependent clp protease atp-binding subunit clpx | DHW03_01315 | Not Available | Positive | 275135 - 276373 | 46088.9 |
| amp nucleosidase | DHW03_01320 | Not Available | Positive | 276567 - 277373 | 29677.2 |
| rna polymerase sigma factor rpod/siga | DHW03_01325 | Not Available | Negative | 277476 - 278336 | 32636.0 |
| transcriptional regulator | DHW03_01330 | Not Available | Positive | 278839 - 279045 | 7627.52 |
| adp-forming succinate--coa ligase subunit beta | DHW03_01335 | Not Available | Negative | 279356 - 280555 | 43138.0 |
| hypothetical protein | DHW03_01340 | Not Available | Negative | 280832 - 281119 | 10495.6 |
| hypothetical protein | DHW03_01345 | Not Available | Negative | 281248 - 281865 | 23760.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

