Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectin esterase | DHW03_08925 | Not Available | Positive | 2056204 - 2057220 | 37732.2 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | DHW03_08930 | Not Available | Negative | 2057829 - 2059454 | 60230.7 |
| mfs transporter | DHW03_08935 | Not Available | Negative | 2059571 - 2061010 | 53360.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DHW03_08940 | Not Available | Negative | 2061033 - 2061692 | 24038.5 |
| carbohydrate kinase | DHW03_08945 | Not Available | Negative | 2061692 - 2062741 | 38887.3 |
| glucuronate isomerase | DHW03_08950 | Not Available | Negative | 2062854 - 2064254 | 53613.2 |
| altronate hydrolase | DHW03_08955 | Not Available | Negative | 2064345 - 2065991 | 59617.0 |
| altronate oxidoreductase | DHW03_08960 | Not Available | Negative | 2065993 - 2067504 | 56459.5 |
| pectate lyase | DHW03_08965 | Not Available | Negative | 2067551 - 2068582 | 38882.8 |
| glucuronyl hydrolase | DHW03_08970 | Not Available | Negative | 2068789 - 2070720 | 71996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

