Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | DHW03_08775 | Not Available | Positive | 2021600 - 2022304 | 25855.7 |
| ribosome recycling factor | DHW03_08780 | Not Available | Positive | 2022345 - 2022908 | 20739.0 |
| translation initiation factor if-2 | DHW03_08785 | Not Available | Negative | 2023220 - 2026297 | 110722.0 |
| transcription termination/antitermination protein nusa | DHW03_08790 | Not Available | Negative | 2026359 - 2027603 | 46984.9 |
| ribosome assembly cofactor rimp | DHW03_08795 | Not Available | Negative | 2027668 - 2028132 | 17176.9 |
| hypothetical protein | DHW03_08800 | Not Available | Negative | 2028254 - 2028685 | 15788.3 |
| phage holin family protein | DHW03_08805 | Not Available | Positive | 2028704 - 2029048 | 11995.5 |
| acyl-coa dehydrogenase | DHW03_08810 | Not Available | Negative | 2029114 - 2030253 | 41743.1 |
| hypothetical protein | DHW03_08815 | Not Available | Negative | 2030433 - 2031359 | 35088.1 |
| aspartate 1-decarboxylase | DHW03_08820 | Not Available | Negative | 2031418 - 2031768 | 12783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

