Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding transcriptional accessory protein | DHW03_08720 | Not Available | Positive | 2011099 - 2013387 | 84680.8 |
| mechanosensitive ion channel protein mscs | DHW03_08725 | Not Available | Negative | 2013530 - 2014609 | 41377.7 |
| nicotinamide riboside transporter pnuc | DHW03_08730 | Not Available | Positive | 2014760 - 2015422 | 25921.4 |
| atpase | DHW03_08735 | Not Available | Positive | 2015419 - 2016399 | 37802.3 |
| duf2442 domain-containing protein | DHW03_08740 | Not Available | Negative | 2016576 - 2016818 | 9629.43 |
| 50s ribosomal protein l13 | DHW03_08750 | Not Available | Positive | 2017624 - 2018067 | 16362.0 |
| 30s ribosomal protein s9 | DHW03_08755 | Not Available | Positive | 2018071 - 2018457 | 14144.3 |
| 30s ribosomal protein s2 | DHW03_08760 | Not Available | Positive | 2018476 - 2019336 | 31800.5 |
| elongation factor ts | DHW03_08765 | Not Available | Positive | 2019466 - 2020311 | 29756.6 |
| n-acetylglucosamine-6-phosphate deacetylase | DHW03_08770 | Not Available | Positive | 2020438 - 2021535 | 39820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

