Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter yonginense |
| Strain | strain KCTC22721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1361659 bp
Thymine Count
1348103 bp
Guanine Count
832125 bp
Cytosine Count
830530 bp
Genome Length
4372417 bp
Protein-coding Genes
3747 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase tatd | DHW03_07205 | Not Available | Negative | 1629186 - 1629953 | 28989.6 |
| excinuclease abc subunit uvra | DHW03_07210 | Not Available | Negative | 1629988 - 1632897 | 108551.0 |
| hypothetical protein | DHW03_07215 | Not Available | Negative | 1633009 - 1633977 | 36936.6 |
| cell filamentation protein fic | DHW03_07220 | Not Available | Positive | 1634109 - 1634657 | 21417.8 |
| phenylacetic acid degradation protein | DHW03_07225 | Not Available | Negative | 1634694 - 1635740 | 39861.8 |
| murein transglycosylase | DHW03_07230 | Not Available | Negative | 1636049 - 1636819 | 29106.9 |
| pseudouridylate synthase | DHW03_07235 | Not Available | Positive | 1637085 - 1638620 | 58679.6 |
| 6-phosphogluconolactonase | DHW03_07240 | Not Available | Positive | 1638830 - 1639942 | 40283.7 |
| molecular chaperone dnaj | DHW03_07245 | Not Available | Negative | 1640653 - 1641099 | 17511.7 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | DHW03_07250 | Not Available | Negative | 1641388 - 1642530 | 42440.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

