Xanthomarina spongicola strain DSM 22637

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina spongicola strain DSM 22637 is a distinct microbial strain characterized by a single replicon. This trait indicates a streamlined genomic structure, which could imply efficiency in metabolic processes. The strain is cataloged under the accession number QGGP00000000.1, providing a reference point for genomic studies and comparisons with other microorganisms. Xanthomarina spongicola is notable for its ecological niche, as it is associated with marine environments. The specific adaptations that allow this strain to thrive in such habitats may provide insights into its metabolic capabilities and interactions within its ecosystem. Given the complexities of marine microbiomes, the presence of Xanthomarina spongicola contributes to the broader understanding of microbial diversity and function in oceanic systems. The unique traits of Xanthomarina spongicola strain DSM 22637 highlight its potential role in biogeochemical cycles and its importance in marine ecology. By studying such strains, researchers can gain valuable knowledge about microbial dynamics, nutrient cycling, and the overall health of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina spongicola
Strainstrain DSM 22637

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomarina spongicola strain DSM 22637


Gene Summary

Adenine Count

1085414 bp

Thymine Count

1083849 bp

Guanine Count

494136 bp

Cytosine Count

491695 bp

Genome Length

3155334 bp

Protein-coding Genes

2909 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
manganese/zinc/iron transport system permease proteinLX78_00374Not AvailableNegative419519 - 42064641123.8
manganese/zinc/iron transport system atp- binding proteinLX78_00375Not AvailableNegative420646 - 42138327175.2
manganese/zinc/iron transport system substrate-binding proteinLX78_00376Not AvailableNegative421383 - 42229433539.4
outer membrane putative beta-barrel porin/alpha-amylaseLX78_00377Not AvailableNegative422297 - 42313331103.1
dtxr family iron (metal) dependent repressorLX78_00378Not AvailableNegative423087 - 42374925049.7
hypothetical proteinLX78_00379Not AvailablePositive423866 - 42428515766.3
hypothetical proteinLX78_00380Not AvailableNegative424315 - 4244525242.52
ferrous iron transport protein bLX78_00381Not AvailableNegative424483 - 42658277991.2
ferrous iron transport protein aLX78_00382Not AvailableNegative426575 - 4268088444.49
protein sco1/2LX78_00383Not AvailableNegative426882 - 42755325975.6

Displaying genes 381 – 390 of 426 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.