Xanthomarina spongicola strain DSM 22637

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Xanthomarina

Description

Xanthomarina spongicola strain DSM 22637 is a distinct microbial strain characterized by a single replicon. This trait indicates a streamlined genomic structure, which could imply efficiency in metabolic processes. The strain is cataloged under the accession number QGGP00000000.1, providing a reference point for genomic studies and comparisons with other microorganisms. Xanthomarina spongicola is notable for its ecological niche, as it is associated with marine environments. The specific adaptations that allow this strain to thrive in such habitats may provide insights into its metabolic capabilities and interactions within its ecosystem. Given the complexities of marine microbiomes, the presence of Xanthomarina spongicola contributes to the broader understanding of microbial diversity and function in oceanic systems. The unique traits of Xanthomarina spongicola strain DSM 22637 highlight its potential role in biogeochemical cycles and its importance in marine ecology. By studying such strains, researchers can gain valuable knowledge about microbial dynamics, nutrient cycling, and the overall health of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusXanthomarina
SpeciesXanthomarina spongicola
Strainstrain DSM 22637

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomarina spongicola strain DSM 22637


Gene Summary

Adenine Count

1085414 bp

Thymine Count

1083849 bp

Guanine Count

494136 bp

Cytosine Count

491695 bp

Genome Length

3155334 bp

Protein-coding Genes

2909 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinLX78_00001Not AvailableNegative1 - 71224903.1
aryl-alcohol dehydrogenase-like predicted oxidoreductaseLX78_00002Not AvailableNegative936 - 197339124.6
23s ribosomal rnaNot AvailableNot AvailablePositive2454 - 5268Not Available
putative cxxch cytochrome family proteinLX78_00003Not AvailableNegative2007 - 417282883.3
chemotaxis protein motbLX78_00004Not AvailableNegative4191 - 515035082.4
5s ribosomal rnaNot AvailableNot AvailablePositive5398 - 5505Not Available
exodeoxyribonuclease-3LX78_00005Not AvailableNegative5156 - 592329501.2
hypothetical proteinLX78_00006Not AvailablePositive6066 - 9479129211.0
hypothetical proteinLX78_00007Not AvailablePositive9536 - 992515129.5
cobalt-zinc-cadmium resistance protein czcaLX78_00008Not AvailablePositive10051 - 14310157567.0

Displaying genes 1 – 10 of 426 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.