Fibrobacter sp. UWR4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWR4 is a Gram-negative, rod-shaped bacterium that exhibits motility through the presence of flagella. This organism is characterized by having a single replicon, which is indicative of its genetic structure. The sequence data for Fibrobacter sp. UWR4 can be accessed through the accession number QGDU00000000.1. The classification of Fibrobacter sp. UWR4 within the broader context of microbial ecology highlights its potential role in the degradation of plant materials, particularly in anaerobic environments such as the digestive systems of herbivorous animals. This capability is significant as it contributes to nutrient cycling and the breakdown of complex carbohydrates, which are crucial for the ecosystem's health and sustainability. By understanding the traits of Fibrobacter sp. UWR4, researchers can further investigate its ecological roles, especially in relation to fiber degradation and its symbiotic relationships with other microorganisms in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWR4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWR4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWR4 Ga0136291_193, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized protein duf4321BGX12_12348Not AvailablePositive2447590 - 244791311662.8
aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit aBGX12_12349Not AvailablePositive2447913 - 244933149696.3
hypothetical proteinBGX12_1241Not AvailablePositive2450247 - 245094825058.8
parallel beta helix pectate lyase-like proteinBGX12_1242Not AvailablePositive2451082 - 245375798216.8
uncharacterized protein (tigr02147 family)BGX12_1243Not AvailablePositive2453990 - 245482031626.0
hypothetical proteinBGX12_1244Not AvailablePositive2454817 - 245638258081.4
carbohydrate binding protein with cbm6 domainBGX12_1245Not AvailablePositive2456546 - 245869078510.7
beta-galactosidaseBGX12_1246Not AvailablePositive2458886 - 2462809146825.0
alpha-l-fucosidase 2BGX12_1247Not AvailablePositive2463058 - 2466057108752.0
polyhydroxybutyrate depolymeraseBGX12_1248Not AvailableNegative2466439 - 246795353602.5

Displaying genes 2121 – 2130 of 2499 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.