Ruminococcus flavefaciens strain SAb67

Coccianaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus flavefaciens strain SAb67 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This strain is primarily found in the gut and rumen environments of various hosts, including Homo sapiens (humans), Bos taurus (cattle), Ovis aries (sheep), and Sus scrofa (pigs). Ruminococcus flavefaciens plays a significant role in the digestive processes of these animals, particularly in the breakdown of complex carbohydrates in the rumen. Its ability to thrive in the gut environment suggests an adaptation to the unique conditions present in the digestive systems of these hosts. The strain is associated with a single replicon, indicating a streamlined genetic organization that may contribute to its efficiency in carbohydrate fermentation and nutrient absorption. The accessions for this strain, specifically QGDI00000000.1, provide a reference for further genomic studies, which can elucidate its metabolic pathways and ecological roles. In summary, Ruminococcus flavefaciens strain SAb67 is an important member of the gut microbiota in several mammalian species, reflecting its potential contributions to host digestion and overall health. Its presence in the rumen highlights the intricate relationships between gut bacteria and their animal hosts in the context of nutrient cycling and energy extraction from dietary sources.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus flavefaciens
Strainstrain SAb67

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus flavefaciens strain SAb67
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut; rumen
Biotic relationshipNot Available
Host(s)Homo sapiens, Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus flavefaciens strain SAb67


Gene Summary

Adenine Count

1013884 bp

Thymine Count

1006768 bp

Guanine Count

904216 bp

Cytosine Count

902372 bp

Genome Length

3832489 bp

Protein-coding Genes

3307 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna ligase (nad+)IE37_03380Not AvailablePositive3718829 - 372078472379.5
rna polymerase sigma-70 factor (ecf subfamily)IE37_03381Not AvailablePositive3720925 - 372142219095.8
putative zinc finger proteinIE37_03382Not AvailablePositive3721419 - 372212027104.3
cpxc motif proteinIE37_03383Not AvailableNegative3722154 - 372280425124.7
hypothetical proteinIE37_03384Not AvailableNegative3723042 - 372395636495.3
23s rrna (uracil1939-c5)-methyltransferaseIE37_03385Not AvailableNegative3723957 - 372531549214.4
oxygen-independent coproporphyrinogen-3 oxidaseIE37_03386Not AvailableNegative3725279 - 372676955704.7
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii)IE37_03387Not AvailableNegative3726762 - 372740023799.2
gtp pyrophosphokinaseIE37_03388Not AvailableNegative3727411 - 372970887982.6
single-stranded-dna-specific exonucleaseIE37_03389Not AvailableNegative3729713 - 373175574200.5

Displaying genes 3361 – 3370 of 3453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.