Ruminococcus flavefaciens strain YL228

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus flavefaciens strain YL228 is a Gram-positive bacterium predominantly found in the gut, specifically within the rumen of herbivorous mammals. This microbe is characterized by its role in the fermentation of plant materials, contributing to the complex microbial ecosystem of the rumen, where it aids in the breakdown of fibrous carbohydrates. The presence of R. flavefaciens is essential for optimizing nutrient absorption in ruminants, as it helps facilitate the digestion of cellulose and other polysaccharides that are otherwise challenging for the host to metabolize. Strain YL228 may exhibit specific metabolic capabilities that enhance its efficiency in fiber degradation, although precise biochemical pathways have not been detailed in the provided data. Its adaptation to the rumen environment suggests a symbiotic relationship with its host, contributing to the overall health and productivity of ruminants. The study of Ruminococcus flavefaciens strain YL228 offers insights into the intricate interactions between microbial communities and their hosts, highlighting the importance of gut microbiota in digestive processes. Understanding the mechanisms underlying its function could provide valuable information for improving livestock management and enhancing feed efficiency through microbial modulation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus flavefaciens
Strainstrain YL228

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut; rumen
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus flavefaciens strain YL228


Gene Summary

Adenine Count

914172 bp

Thymine Count

902966 bp

Guanine Count

792437 bp

Cytosine Count

753831 bp

Genome Length

3365971 bp

Protein-coding Genes

2782 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rna . bacterial ssuNot AvailableNot Available+29 - 142318.01
5s ribosomal rna . bacterial tsuNot AvailableNot Available+31 - 14718.01
hypothetical proteinSAMN02910280_0380Not Available+166 - 86725465.9
peptidoglycan-binding (pgrp) domain of peptidoglycan hydrolases-containing proteinSAMN02910280_0381Not Available+871 - 226252407.8
peptidoglycan-binding (pgrp) domain of peptidoglycan hydrolases-containing proteinSAMN02910280_0382Not Available+2573 - 307918847.2
putative peptidoglycan binding domain-containing proteinSAMN02910280_0383Not Available+3289 - 374116444.3
hypothetical proteinSAMN02910280_0384Not Available+3941 - 458824291.8
glutamyl-trna synthetaseSAMN02910280_0385Not Available+4770 - 641062736.0
methionyl-trna synthetaseSAMN02910280_0386Not Available+6710 - 871976788.7
cysteine synthase aSAMN02910280_0387Not Available+8917 - 985233493.3

Displaying genes 1 – 10 of 2834 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites