Ruminococcus flavefaciens strain SAb67

Coccianaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus flavefaciens strain SAb67 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This strain is primarily found in the gut and rumen environments of various hosts, including Homo sapiens (humans), Bos taurus (cattle), Ovis aries (sheep), and Sus scrofa (pigs). Ruminococcus flavefaciens plays a significant role in the digestive processes of these animals, particularly in the breakdown of complex carbohydrates in the rumen. Its ability to thrive in the gut environment suggests an adaptation to the unique conditions present in the digestive systems of these hosts. The strain is associated with a single replicon, indicating a streamlined genetic organization that may contribute to its efficiency in carbohydrate fermentation and nutrient absorption. The accessions for this strain, specifically QGDI00000000.1, provide a reference for further genomic studies, which can elucidate its metabolic pathways and ecological roles. In summary, Ruminococcus flavefaciens strain SAb67 is an important member of the gut microbiota in several mammalian species, reflecting its potential contributions to host digestion and overall health. Its presence in the rumen highlights the intricate relationships between gut bacteria and their animal hosts in the context of nutrient cycling and energy extraction from dietary sources.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus flavefaciens
Strainstrain SAb67

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus flavefaciens strain SAb67
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut; rumen
Biotic relationshipNot Available
Host(s)Homo sapiens, Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus flavefaciens strain SAb67

Gene Summary

Adenine Count

1013884 bp

Thymine Count

1006768 bp

Guanine Count

904216 bp

Cytosine Count

902372 bp

Genome Length

3832489 bp

Protein-coding Genes

3307 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit aIE37_02061Not AvailableNegative2274854 - 2277676103668.0
rubredoxin-nad+ reductaseIE37_02062Not AvailablePositive2277975 - 22781305702.48
acetaldehyde dehydrogenase/alcohol dehydrogenaseIE37_02063Not AvailablePositive2278394 - 228103395778.5
trna a-37 threonylcarbamoyl transferase component bud32IE37_02064Not AvailablePositive2281037 - 228178628142.4
hypothetical proteinIE37_02065Not AvailableNegative2281850 - 228251525310.8
uncharacterized protein (upf0371 family)IE37_02066Not AvailableNegative2282622 - 228409154806.0
diguanylate cyclase (ggdef)-like proteinIE37_02067Not AvailablePositive2284316 - 228544342450.9
hypothetical proteinIE37_02069Not AvailablePositive2285751 - 228621216798.9
tyrosyl-trna synthetaseIE37_02070Not AvailablePositive2286333 - 228755045678.7
prepilin-type n-terminal cleavage/methylation domain-containing proteinIE37_02071Not AvailablePositive2287691 - 228825420648.5

Displaying genes 2061 – 2070 of 3453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.