Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_00005 | Not Available | Positive | 1 - 515 | 18671.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 254 - 1610 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 359 - 475 | Not Available |
| dna-binding protein | DI534_00010 | Not Available | Positive | 669 - 956 | 10881.9 |
| hypothetical protein | DI534_00015 | Not Available | Positive | 958 - 1602 | 23447.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1084 - 1198 | Not Available |
| dna-processing protein dpra | DI534_00020 | Not Available | Negative | 1604 - 2668 | 36064.8 |
| hypothetical protein | DI534_00030 | Not Available | Negative | 7715 - 8239 | 19848.6 |
| hypothetical protein | DI534_00035 | Not Available | Negative | 8378 - 8992 | 23537.3 |
| single-stranded dna-binding protein | DI534_00040 | Not Available | Negative | 9002 - 9448 | 16772.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
