Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_04855 | Not Available | Positive | 1023767 - 1024672 | 33868.0 |
| hypothetical protein | DI534_04860 | Not Available | Positive | 1024669 - 1025685 | 36057.7 |
| zn-dependent alcohol dehydrogenase | DI534_04865 | Not Available | Positive | 1025682 - 1026728 | 36040.1 |
| hypothetical protein | DI534_04870 | Not Available | Positive | 1026725 - 1027639 | 32971.2 |
| gfo/idh/moca family oxidoreductase | DI534_04875 | Not Available | Positive | 1027636 - 1028772 | 40793.1 |
| hypothetical protein | DI534_04880 | Not Available | Positive | 1028769 - 1029533 | 26207.3 |
| hypothetical protein | DI534_04885 | Not Available | Positive | 1029533 - 1030588 | 36824.8 |
| gntr family transcriptional regulator | DI534_04890 | Not Available | Negative | 1030590 - 1031381 | 29266.2 |
| guab3 family imp dehydrogenase-related protein | DI534_04895 | Not Available | Positive | 1031473 - 1032594 | 39349.1 |
| mfs transporter | DI534_04900 | Not Available | Positive | 1032687 - 1033865 | 40156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
