Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | DI534_04805 | Not Available | Negative | 1011552 - 1012529 | 34863.4 |
| branched-chain amino acid abc transporter permease | DI534_04810 | Not Available | Negative | 1012532 - 1013965 | 50385.2 |
| imp dehydrogenase | DI534_04815 | Not Available | Positive | 1014117 - 1015619 | 52875.3 |
| hypothetical protein | DI534_04820 | Not Available | Positive | 1015665 - 1017194 | 53995.7 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | DI534_04825 | Not Available | Negative | 1017259 - 1018752 | 52220.2 |
| 5-dehydro-2-deoxygluconokinase | DI534_04830 | Not Available | Negative | 1018754 - 1019731 | 34574.9 |
| sugar abc transporter substrate-binding protein | DI534_04835 | Not Available | Positive | 1019823 - 1021118 | 44849.7 |
| abc transporter permease | DI534_04840 | Not Available | Positive | 1021126 - 1022082 | 34666.2 |
| carbohydrate abc transporter permease | DI534_04845 | Not Available | Positive | 1022097 - 1022915 | 29417.8 |
| hypothetical protein | DI534_04850 | Not Available | Positive | 1022953 - 1023774 | 29094.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
