Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s9 | DI534_04705 | Not Available | Positive | 993679 - 994167 | 17573.1 |
| phosphoglucosamine mutase | DI534_04710 | Not Available | Positive | 994191 - 995558 | 47306.7 |
| nitroreductase family deazaflavin-dependent oxidoreductase | DI534_04715 | Not Available | Positive | 995581 - 996033 | 16542.3 |
| type i pantothenate kinase | DI534_04720 | Not Available | Negative | 996030 - 996992 | 35790.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DI534_04725 | Not Available | Positive | 997052 - 998902 | 65344.6 |
| holo-acp synthase | DI534_04730 | Not Available | Positive | 998905 - 999261 | 12533.2 |
| alanine racemase | DI534_04735 | Not Available | Positive | 999258 - 1000352 | 37542.1 |
| hypothetical protein | DI534_04740 | Not Available | Positive | 1000318 - 1000512 | 6068.09 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DI534_04745 | Not Available | Positive | 1000445 - 1000921 | 16089.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DI534_04750 | Not Available | Positive | 1001004 - 1001615 | 20796.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
