Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s5 | DI534_04605 | Not Available | Positive | 976338 - 977018 | 23655.2 |
| 50s ribosomal protein l30 | DI534_04610 | Not Available | Positive | 977018 - 977203 | 6902.42 |
| 50s ribosomal protein l15 | DI534_04615 | Not Available | Positive | 977203 - 977976 | 25761.4 |
| preprotein translocase subunit secy | DI534_04620 | Not Available | Positive | 978064 - 979392 | 48247.0 |
| adenylate kinase | DI534_04625 | Not Available | Positive | 979401 - 979994 | 21394.3 |
| transcriptional antiterminator | DI534_04630 | Not Available | Negative | 980104 - 981993 | 69307.3 |
| pts iib subunit | DI534_04635 | Not Available | Positive | 982232 - 982549 | 10412.5 |
| hpr family phosphocarrier protein | DI534_04640 | Not Available | Positive | 982549 - 982824 | 9444.06 |
| phosphoenolpyruvate--protein phosphotransferase | DI534_04645 | Not Available | Positive | 982821 - 984506 | 57913.8 |
| pts mannitol transporter subunit iib | DI534_04650 | Not Available | Positive | 984537 - 986090 | 53572.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
