Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s3 | DI534_04555 | Not Available | Positive | 971780 - 972526 | 27668.2 |
| 50s ribosomal protein l16 | DI534_04560 | Not Available | Positive | 972529 - 972948 | 15470.9 |
| 50s ribosomal protein l29 | DI534_04565 | Not Available | Positive | 972948 - 973274 | 11886.2 |
| 30s ribosomal protein s17 | DI534_04570 | Not Available | Positive | 973274 - 973612 | 12437.0 |
| 50s ribosomal protein l14 | DI534_04575 | Not Available | Positive | 973616 - 973984 | 13233.3 |
| 50s ribosomal protein l24 | DI534_04580 | Not Available | Positive | 973987 - 974349 | 13103.9 |
| 50s ribosomal protein l5 | DI534_04585 | Not Available | Positive | 974349 - 974927 | 21200.5 |
| 30s ribosomal protein s8 | DI534_04590 | Not Available | Positive | 975002 - 975400 | 14430.5 |
| 50s ribosomal protein l6 | DI534_04595 | Not Available | Positive | 975407 - 975943 | 18996.9 |
| 50s ribosomal protein l18 | DI534_04600 | Not Available | Positive | 975946 - 976305 | 12840.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
