Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | DI534_04505 | Not Available | Positive | 963190 - 965304 | 77089.2 |
| elongation factor tu | DI534_04510 | Not Available | Positive | 965447 - 966640 | 43461.0 |
| hypothetical protein | DI534_04515 | Not Available | Positive | 966870 - 967853 | 35833.9 |
| 30s ribosomal protein s10 | DI534_04520 | Not Available | Positive | 968253 - 968561 | 11432.0 |
| 50s ribosomal protein l3 | DI534_04525 | Not Available | Positive | 968595 - 969245 | 22902.8 |
| 50s ribosomal protein l4 | DI534_04530 | Not Available | Positive | 969248 - 969901 | 22649.0 |
| 50s ribosomal protein l23 | DI534_04535 | Not Available | Positive | 969898 - 970197 | 10978.5 |
| 50s ribosomal protein l2 | DI534_04540 | Not Available | Positive | 970215 - 971054 | 30473.8 |
| 30s ribosomal protein s19 | DI534_04545 | Not Available | Positive | 971067 - 971348 | 10719.1 |
| 50s ribosomal protein l22 | DI534_04550 | Not Available | Positive | 971376 - 971780 | 14547.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
