Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type cleavage/methylation domain-containing protein | DI534_04450 | Not Available | Positive | 952709 - 953110 | 14006.7 |
| hypothetical protein | DI534_04455 | Not Available | Positive | 953214 - 954614 | 47663.2 |
| hypothetical protein | DI534_04460 | Not Available | Positive | 954611 - 955303 | 24536.4 |
| prepilin peptidase | DI534_04470 | Not Available | Positive | 957123 - 957950 | 28229.6 |
| pilus assembly protein pilm | DI534_04475 | Not Available | Positive | 957980 - 959029 | 36802.8 |
| hypothetical protein | DI534_04480 | Not Available | Positive | 959026 - 959775 | 26296.1 |
| hypothetical protein | DI534_04485 | Not Available | Positive | 959772 - 960542 | 25756.2 |
| hypothetical protein | DI534_04490 | Not Available | Positive | 960603 - 961988 | 48342.3 |
| 30s ribosomal protein s12 | DI534_04495 | Not Available | Positive | 962259 - 962627 | 13444.6 |
| 30s ribosomal protein s7 | DI534_04500 | Not Available | Positive | 962633 - 963103 | 17330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
